FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25749977
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATTG82450.017.3066921
GGGAATG67200.017.1272161
CGGACTG65600.017.0419271
TGATTTC84200.017.0063721
ACTGATG78850.016.917451
GGGAGAT65450.016.8518141
TTTATGC68500.016.8021761
GCGCGAT63650.016.7785191
TCTATTG78250.016.7532521
ATGCGAT55350.016.6207641
ACTGAAC81750.016.6108861
TACTTGT86750.016.5871621
GTACTTT87350.016.5762561
CCGGGAT58550.016.4979881
GAATGAA71500.016.4747941
ACCTTTA97150.016.4686471
TGACGGC63800.016.4412781
TGCGGGT66150.016.4316231
TGACTAG62350.016.3745751
GACCTGG84100.016.348861
Produced by FastQC (version 0.11.5)