FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31082863
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATGGA115650.017.3909388
GATGCTA91250.016.7882291
TAGTTGG77450.016.745481
ACTGATG87200.016.7423131
TTGACTT106550.016.7049661
TACTTGT99900.016.685881
GGTATTG84150.016.6480391
ATGCGAT69750.016.6443581
GGATTAC91450.016.6421721
TCTATTG91250.016.580021
TTTATGC81900.016.5681881
CGCTTCA109600.016.559421
TGCGTGG88550.016.5548211
TGATTTC94550.016.551291
CCGGGAT71700.016.5124531
GACTAAC86550.016.4521241
GTACTTT102200.016.4473481
AGATATG74750.016.4302358
CTGCCTA105450.016.3861221
CTCGAAA93750.016.3618771
Produced by FastQC (version 0.11.5)