FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14878312
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGAGAGT407647927.39880034778139No Hit
CTATAGTG384467725.84081446873812Clontech Universal Primer Mix Short (100% over 8bp)
AGTCCCAC375491025.23747317572047No Hit
TACGTTCA303275620.38373707985153No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)