FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14878312
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTTGT51100.017.6342321
TCTATTG47400.017.1750771
TAAATGA38100.017.0627789
GGTATTG39600.016.9717541
GGAACTT42800.016.8712021
CGTTGGG47250.016.8486021
GGGACCT35000.016.8306121
CAATGGA42700.016.7939998
CCGGGAT34200.016.7564141
GTAAATG50600.016.6822578
ATGAATG33400.016.58889210
AGATATG29000.016.5886088
GGGAATG34450.016.5767561
CTAGCCT59950.016.5324441
GTAACTG48150.016.450591
GATGCTA40500.016.3723531
ATGCGAT31950.016.3713111
GCGCGAT27250.016.3689561
TATTGAG23500.016.3392753
TGATTTC43450.016.3195841
Produced by FastQC (version 0.11.5)