FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14550356
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTATTG48350.017.2688671
GGGACCT36650.017.215881
GGTATTG39850.017.1633361
ATGCGAT30700.017.0999491
TGATTTC40000.017.0739751
TACTTGT48750.016.9835931
GGGAATG36900.016.9366511
CAATGGA42450.016.893168
GAATGAA47750.016.8157421
TAAATGA35650.016.803899
TATTGAG24600.016.7883013
TTTACTG50100.016.7854181
CGTTGGG47600.016.7636971
GTACTTT45400.016.6730061
AGATATG29600.016.6580688
GAAATGA57050.016.6160051
TGACTAG46950.016.612421
CCGGGAT30750.016.551851
GACCTGG48250.016.4756951
ATGAATG28250.016.46167610
Produced by FastQC (version 0.11.5)