EGAF00005282011 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282011
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1001260
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	32066	3.202564768391826	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	14031	1.4013343187583645	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	10030	1.0017378103589478	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	6049	0.6041387851307353	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	4367	0.43615045043245515	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	3198	0.3193975590755648	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	2797	0.27934802149291893	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1446	0.14441803327806962	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1203	0.12014861274793759	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	2470	95.69128	1
GTCTCTC	3475	90.91155	2
TCTCTCA	3745	84.74149	3
AGTCTCT	3920	81.25154	1
CTGATGG	8275	80.63776	1
CTCAAAC	8570	78.19248	8
GCTCAAA	8675	77.07626	7
TCAAACA	8755	76.37959	9
GGCTCAA	8760	76.246216	6
TGGCTCA	9020	74.2841	5
GATGGCT	9210	72.90064	3
CTCTCAG	4375	72.54234	4
AGCTGGT	4395	71.73532	9
ATGGCTC	9450	71.05274	4
TCAGCTG	4490	70.53112	7
CTCAGCT	4745	67.04409	6
TCCGATC	175	65.80462	6
TGATGGC	10315	65.021355	2
TCTCAGC	5100	61.809704	5
CAGCTGG	5220	61.08426	8