FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757611
Sequences flagged as poor quality0
Sequence length8
%GC75

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGACG73873197.50795592989014No Hit
CCCCGACG52780.696663591209737No Hit
ACCCGCCG41920.5533182596345618No Hit
ACCCGACA20720.2734912771857853No Hit
ACACGACG9820.1296179701720276Illumina Single End PCR Primer 1 (100% over 8bp)
ACCCCACG9630.12711008683876027No Hit
ACCCGACC9230.12183033245293429No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)