FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282051

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282051
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences768699
Sequences flagged as poor quality0
Sequence length8
%GC75

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGACG74915397.45726220536257No Hit
CCCCGACG56420.7339673916578531No Hit
ACCCGCCG45260.5887870284727832No Hit
ACCCGACA20730.2696764273142023No Hit
ACACGACG9380.12202435543691355Illumina Single End PCR Primer 1 (100% over 8bp)
ACCCGACC9310.12111372591872761No Hit
ACCCCACG9210.11981282660703345No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)