FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences968983
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAACAAA95700198.7634457983267No Hit
GCAAAAAA23800.24561834418147685No Hit
ACAACAAA20720.21383244081681516No Hit
TCAACAAA15530.16027112962766116No Hit
CCAACAAA11810.12188036322618662No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)