FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1024979
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAACAAA101365398.89500175125539No Hit
GCAAAAAA23600.2302486197278188No Hit
ACAACAAA17200.1678083160728171No Hit
TCAACAAA12780.12468548136108154No Hit
CCAACAAA11850.11561212473621411No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)