FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1488665
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACATCC146218798.22135940591068No Hit
CTACATCA62970.42299644312185747No Hit
CAACATCC42680.2866998283697138No Hit
CTACAACC37510.25197072544864024No Hit
CTACCTCC23320.15665042168654467No Hit
CTACATAC18140.12185414448515954No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)