FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1444429
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTCCAA141671198.08104102036168No Hit
TCCTCAAA78970.5467212303270012No Hit
TCCACCAA42870.29679548112091353No Hit
ACCTCCAA35190.24362568184382893No Hit
TCCTCTAA16550.11457814818173824No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)