FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences722630
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTATG70944898.17582995447187No Hit
TGTCTATA28520.39466947123700924No Hit
AGTCTATG13240.183219628302174No Hit
TGTCAATG12090.16730553672003654No Hit
TGACTATG9990.1382450216570029No Hit
TGTCTAAG9760.1350622033405754No Hit
TGGCTATG7920.10959965680915544No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)