FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences745685
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTATG73251898.23424099988601No Hit
TGTCTATA28370.3804555542890094No Hit
TGTCAATG13550.18171211704674226No Hit
AGTCTATG13500.1810415926295956No Hit
TGTCTAAG9980.13383667366247143No Hit
TGACTATG9390.12592448554014096No Hit
TGGCTATG8190.10983189952862132No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)