FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences721066
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTATG70772798.15009999084688No Hit
TGTCTATA27790.3854016137219062No Hit
TGTCAATG13330.18486518571115543No Hit
AGTCTATG13130.18209151450768724No Hit
TGTCTAAG10240.14201196561757176No Hit
TGACTATG9100.12620203975780303No Hit
TGGCTATG8760.12148679871190708No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)