FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences891392
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCACGAA87078097.68766154508903No Hit
ACCACAAA36750.4122765292935095No Hit
CCCACGAA35740.4009459362435382No Hit
ACCACCAA33400.37469485927627805No Hit
ACAACGAA25840.2898836875358989No Hit
ACCCCGAA13960.15660898908673176No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)