FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences904591
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCACGAA88363897.68370456924733No Hit
CCCACGAA37940.4194160675929785No Hit
ACCACAAA37240.4116777637628497No Hit
ACCACCAA33230.3673483375359693No Hit
ACAACGAA23580.26067029187776575No Hit
ACCCCGAA16420.18151849841530593No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)