EGAF00005282206 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282206
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1467288
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	43139	2.9400499424789133	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	24952	1.7005523114753205	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	13191	0.8990055122102818	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8937	0.6090828794347123	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	7340	0.5002426244881714	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	5394	0.36761699134730197	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4633	0.31575259935336486	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2710	0.1846944839731532	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1685	0.11483771420470965	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3120	0.0	100.31533	1
GTCTCTC	3755	0.0	84.884125	2
GCTCAAA	13180	0.0	82.90514	7
GGCTCAA	13185	0.0	82.819115	6
TCTCTCA	3875	0.0	82.258255	3
CTCAAAC	13455	0.0	81.376724	8
CTGATGG	13725	0.0	79.577835	1
TGGCTCA	13890	0.0	78.50655	5
TCAAACA	13970	0.0	78.495926	9
ATGGCTC	13990	0.0	78.075775	4
GATGGCT	15245	0.0	71.55159	3
AGCTGGT	4820	0.0	66.474724	9
ATACGGC	55	4.2408083E-6	65.43391	5
AGTCTCT	4930	0.0	65.2369	1
TCAGCTG	5055	0.0	62.93993	7
TGATGGC	17570	0.0	62.28596	2
CTCTCAG	5280	0.0	60.780354	4
TCTCAGC	5800	0.0	55.596252	5
TACGGCG	65	1.141338E-5	55.370926	6
CTCAGCT	5810	0.0	55.132668	6