EGAF00005282219 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282219
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1291754
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	38254	2.9613997711638596	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	22337	1.7291992128532212	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	11517	0.8915784274714846	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8092	0.6264350642614616	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	6506	0.5036562689180757	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	4859	0.37615521221532894	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4115	0.31855910645525387	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2453	0.18989683794282813	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1424	0.11023770779885335	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	2725	97.972244	1
GTCTCTC	3135	89.06147	2
CTGATGG	11540	83.43455	1
GCTCAAA	11605	83.126656	7
GGCTCAA	11620	82.95739	6
CTCAAAC	11845	81.62785	8
TCTCTCA	3500	79.57727	3
TGGCTCA	12160	78.9713	5
ATGGCTC	12185	78.73495	4
TCAAACA	12325	78.57784	9
GATGGCT	12980	73.743385	3
AGCTGGT	4075	68.20629	9
AGTCTCT	4175	66.70373	1
TGATGGC	15050	63.784473	2
TCAGCTG	4455	62.376392	7
CTCTCAG	4655	59.98946	4
TCCGATC	170	59.287037	6
CAGCTGG	4980	55.802727	8
TCTCAGC	5070	55.231728	5
CTCAGCT	5245	54.216595	6