EGAF00005282229 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282229
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1743460
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	53495	3.0683239076319504	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	30907	1.772739265598293	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	16136	0.9255159280970026	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	11118	0.6376974521927661	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	9032	0.5180503137439345	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	6793	0.3896275222832758	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	5591	0.3206841567916671	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	3451	0.19793972904454363	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2274	0.13043029378362567	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3710	104.68752	1
GTCTCTC	4580	89.725266	2
TCTCTCA	4915	83.607315	3
GGCTCAA	15875	80.79796	6
GCTCAAA	15955	80.395134	7
CTGATGG	16270	79.36528	1
CTCAAAC	16335	78.70343	8
TGGCTCA	16610	77.30706	5
TCAAACA	16800	76.53162	9
ATGGCTC	17055	75.28565	4
GATGGCT	18370	70.08626	3
AGTCTCT	6155	66.84795	1
AGCTGGT	6210	65.72948	9
TCAGCTG	6430	63.473286	7
TGATGGC	20980	61.609123	2
CTCTCAG	6775	60.76532	4
CAGCTGG	7175	57.486263	8
CTCAGCT	7425	55.256683	6
TCTCAGC	7510	54.629707	5
TCCGATC	215	46.870113	6