EGAF00005282232 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282232
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1747393
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	51386	2.9407236952419975	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	29685	1.6988164654430915	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	15506	0.8873790841556536	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	10738	0.6145154524483044	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	8686	0.49708336933935293	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	6389	0.3656303991145667	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	5267	0.30142045893511077	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	3333	0.19074129288603078	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1895	0.10844726973268178	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3830	102.6006	1
GTCTCTC	4525	88.27352	2
TCTCTCA	4725	84.54191	3
GGCTCAA	15540	80.091606	6
GCTCAAA	15620	79.819664	7
CTGATGG	15975	78.16542	1
CTCAAAC	15965	78.14435	8
TGGCTCA	16405	75.9081	5
TCAAACA	16475	75.64874	9
ATGGCTC	16775	74.358284	4
AGTCTCT	5770	69.476105	1
GATGGCT	18065	69.00663	3
AGCTGGT	5815	67.72792	9
TCCGATC	270	66.65294	6
TCAGCTG	6015	65.22347	7
TTCCGAT	285	63.141273	5
CTCTCAG	6585	60.66393	4
TGATGGC	20895	59.65702	2
CAGCTGG	7030	56.731247	8
CTTCCGA	320	56.231976	4