EGAF00005282242 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282242
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1639299
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	49408	3.0139712157452667	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	28159	1.717746426978849	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	14796	0.9025809202592083	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	10180	0.6209971457311937	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	8284	0.5053379523808652	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	6117	0.3731473025970247	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	5284	0.3223328996113583	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	3001	0.18306605445376345	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2084	0.12712750999055084	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3585	102.89486	1
GTCTCTC	4170	91.81168	2
TCTCTCA	4365	88.03718	3
GGCTCAA	14875	82.026535	6
GCTCAAA	14905	81.81314	7
CTCAAAC	15155	80.65354	8
TCAAACA	15680	78.238075	9
CTGATGG	15700	78.19569	1
TGGCTCA	15685	77.73991	5
ATGGCTC	15915	76.92598	4
TCCGATC	235	76.57973	6
AGTCTCT	5510	70.08516	1
AGCTGGT	5520	70.03738	9
GATGGCT	17540	69.7885	3
TCAGCTG	5750	66.97729	7
CTCTCAG	5905	65.45303	4
TTCCGAT	290	62.0522	5
TGATGGC	20130	61.06136	2
TCTCAGC	6535	59.258663	5
CAGCTGG	6495	59.073093	8