EGAF00005282251 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282251
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1462787
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	45011	3.077071371293292	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	25934	1.7729170412370359	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	13679	0.9351327295088075	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	9363	0.640079519437895	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	7573	0.517710370682813	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	5551	0.37948108644662554	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4705	0.32164628206293877	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2845	0.19449174760235086	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1890	0.1292054140486619	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3150	99.52087	1
GTCTCTC	3800	86.36195	2
TCTCTCA	3890	84.178856	3
GGCTCAA	13510	84.136955	6
GCTCAAA	13580	83.96831	7
CTCAAAC	13855	82.40558	8
CTGATGG	13735	82.272156	1
TGGCTCA	14190	79.78972	5
CCGATCT	190	79.56567	7
TCAAACA	14395	79.31701	9
ATGGCTC	14485	78.35813	4
GATGGCT	15695	71.99123	3
CTTCCGA	225	67.175	4
AGTCTCT	4960	65.9644	1
TCCGATC	230	65.72816	6
AGCTGGT	5015	64.74116	9
TCAGCTG	5090	64.20932	7
TTCCGAT	250	63.340763	5
TGATGGC	18015	62.68013	2
CTCTCAG	5390	61.157204	4