FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1314975
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCACCGT129356998.37213635240214No Hit
TGCACCGA39170.29787638548261375No Hit
TGCCCCGT31860.24228597501853646No Hit
AGCACCGT27930.21239947527519534No Hit
TGCACCGG13590.10334797239491245No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)