FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1343127
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCACCGT132087398.34312019637755No Hit
TGCACCGA39550.29446210224349595No Hit
TGCCCCGT36410.2710838215596887No Hit
AGCACCGT28280.21055343240065907No Hit
TGCACCGG14490.10788257551221887No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)