FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences917918
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTTGCA90496898.58919859943917No Hit
TAGTTGCA22440.24446628130181564No Hit
AAGTTGAA19650.2140714094287289No Hit
AAGTAGCA11250.12255996723018832No Hit
AAGATGCA10920.11896487485810278No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)