FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences722980
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGCTCG71124798.37713353066475No Hit
CCTGCTCG16190.22393427204072036No Hit
ACAGCTCG16040.2218595258513375No Hit
ACTGCTCA15380.21273064261805308No Hit
ACTGCACG10770.14896677639768735No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)