FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences705145
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGCTCG69341198.33594508930787No Hit
ACAGCTCG16390.2324344638336796No Hit
ACTGCTCA15910.22562735323940464No Hit
CCTGCTCG15020.21300583567918654No Hit
ACTGCACG10970.15557084003999178No Hit
ACTGCTCC7390.10480114019102454No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)