FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences694142
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTCTA68184498.22831639635695No Hit
CTCCTCAA35020.5045077232036096No Hit
CTCCACTA15050.21681442701925543No Hit
CACCTCTA11380.1639434006298423No Hit
CTACTCTA8240.11870769957731991No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)