FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences201620
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTTGA19880498.60331316337665No Hit
GATCTTAA3950.19591310385874416No Hit
GATCTAGA3300.16367423866679892ABI Dynabead EcoP Oligo (100% over 8bp)
GATCTTGC3290.1631782561253844No Hit
GATGTTGA3070.15226664021426445No Hit
GATCTCGA2520.12498760043646462No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)