FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences205679
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTTGA20299898.69651252680147No Hit
GATCTTGG4720.22948380729194523No Hit
GATCTTAA4600.22364947320825168No Hit
GATCTAGA3190.1550960477248528ABI Dynabead EcoP Oligo (100% over 8bp)
GATCTCGA2570.12495198829243627No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)