FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196621
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAGGA19372298.52558984035275No Hit
ACTTAGAA8800.4475615524282757No Hit
ACTTAGGG3250.16529261879453364No Hit
ACTTAGGT2260.11494194414635264No Hit
ACGTAGGA1990.101209941969576No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)