FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222439
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAGCTCG21935498.6131029181034No Hit
TTAGCTCA8640.38842109522161133No Hit
TTAGCGCG3690.16588817608422984No Hit
TTAGGTCG3150.14161185763287912No Hit
TTAGCTGG2300.1033991341446419No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)