FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141921
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACTGA14018698.77748888466118No Hit
GCTACTAA3090.21772676348109157No Hit
GCTACTGC2430.17122201788318853No Hit
GCTACTGG1640.11555724663721366No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)