FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153712
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG100.007221451144.078161
CCTTACG306.7666406E-10144.078161
TCAACGA400.0144.078161
AGCCGAC202.2004588E-6143.984382
ACGTTAT100.007235525143.984382
GACGTTG100.007235525143.984382
GGCCGTC100.007235525143.984382
GACAACG100.007235525143.984382
TGAAACG151.2628645E-4143.984382
GCGGGTG151.2628645E-4143.984382
CGGGCTA100.007235525143.984382
GCGGGTA151.2628645E-4143.984382
CATACAA100.007235525143.984382
CTTACGG151.2628645E-4143.984382
GTCGCAA151.2645031E-4143.937557
CGTATCC100.007242569143.937554
CTACTCG100.007242569143.937554
GTCGAAC202.2040276E-6143.937558
TAGACTA202.2040276E-6143.937557
GGATGCG151.2645031E-4143.937559
Produced by FastQC (version 0.11.5)