FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences203502
Sequences flagged as poor quality0
Sequence length8
%GC25

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATTCTA20053798.54301186229128No Hit
TGATTCAA6050.2972943754852532No Hit
TGATTGTA3330.16363475543237904No Hit
TGAATCTA2750.13513380703875147No Hit
TGATTCTT2540.12481449813761043No Hit
TGATTCGA2040.10024471503965564No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)