FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences277419
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGAACG100.007235052144.00832
TCACGCG253.8633516E-8143.982338
AAACTAG151.264025E-4143.982333
ATTAGAC100.007238953143.982335
CGCGGAT253.8633516E-8143.982339
TTTCGCA100.007238953143.982336
ACCGAGC100.007238953143.982334
CTAAGCG151.264025E-4143.982335
AGTATCG151.264025E-4143.982338
TTCGGTA100.007238953143.982334
CGTCGAC100.007238953143.982337
CACGTTG253.8633516E-8143.982338
CGCAATC100.007238953143.982336
CGCGTAC100.007238953143.982335
ATGCATA100.007238953143.982335
CGATAGG202.2037766E-6143.982334
TAATCTG253.8633516E-8143.982335
GATCGTA900.0136.204271
CTGATAG900.0136.204271
CTGCGGA650.0133.122711
Produced by FastQC (version 0.11.5)