FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences271911
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGTTG151.2637656E-4143.988982
TTAGCAA306.8030204E-10143.988984
GCGTTAA151.2637656E-4143.988986
GGGCGTA151.2637656E-4143.988982
TATCGAG151.2637656E-4143.988986
AATCGAC151.2637656E-4143.988986
ACAACGA100.007237877143.988977
CCTTACG351.2732926E-11143.988971
GAAGCGT351.2732926E-11143.988976
TTGGACG100.007237877143.988972
CGTGCTC100.007237877143.988973
AAGACGC253.8620783E-8143.988977
GCCTGTA100.007237877143.988974
GATGGTA100.007237877143.988974
GTTCGCA100.007237877143.988979
ACGGATG253.8620783E-8143.988972
AGCTGCG253.8620783E-8143.988978
GATGCGA202.2031927E-6143.988979
ATTTGTA100.007237877143.988974
TAATCGA253.8620783E-8143.988975
Produced by FastQC (version 0.11.5)