FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences195711
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCAAT19338098.80895810659595No Hit
GTGGCAAA3800.19416384362657182No Hit
GTGGCATT3560.18190086402910413No Hit
GTGGCTAT2740.14000235040442285No Hit
GTGGCAAG2600.13284894563923336No Hit
GTGGGAAT2230.113943518759804No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)