FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178688
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGATGTG17608898.54494985673352No Hit
GCGATGTA4600.2574319484240688No Hit
GCGATGGG4190.23448692693409742No Hit
GCGAGGTG3790.21210154011461319No Hit
GCGTTGTG2630.1471839183381089No Hit
GGGATGTG1870.10465168338108884No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)