FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121562
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGTTA100.007232752143.990542
TCACGGC151.2620055E-4143.990542
TATCAGC100.007232752143.990546
AACGTAG100.007232752143.990543
AGCGTCC100.007232752143.990549
CGTGGCA100.007232752143.990543
GAGGACG100.007232752143.990549
TCGTTAC306.7848305E-10143.990548
GTATTGC100.007232752143.990542
TTTACTC100.007232752143.990549
CCGATTC151.2620055E-4143.990543
ACGTTCT100.007232752143.990544
GCGGTAC151.2620055E-4143.990542
GCGAAGA100.007232752143.990544
TTTCGCT202.1981195E-6143.990549
CGCATTG100.007232752143.990546
CGTTGGG253.8487997E-8143.990541
TTATGCC100.007232752143.990542
TAGCGAG151.2620055E-4143.990543
GGCCGAA100.007232752143.990549
Produced by FastQC (version 0.11.5)