FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124575
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAACTCG100.0072288886144.017672
TCGTTAG100.0072288886144.017676
AGTCCCG100.0072288886144.017676
GTATTGA100.0072288886144.017672
CGTATCT100.0072288886144.017674
GTCGAGC100.0072288886144.017674
TGCCATA100.0072288886144.017675
TGCCAAG100.0072288886144.017675
CATGCGA100.0072288886144.017672
CTATCGG100.0072288886144.017675
CGTGCCA202.1962715E-6144.017673
TTTCGCC100.0072288886144.017676
CGCATGC100.0072288886144.017676
TCGGGGT253.8451617E-8144.017673
TCGGGAC253.8451617E-8144.017671
ATTCGCA100.0072288886144.017672
AAGGTAT100.0072288886144.017675
TACGGTG100.0072288886144.017674
CGATTGA351.2732926E-11144.017671
ATATGGC202.1962715E-6144.017672
Produced by FastQC (version 0.11.5)