Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005282652 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 121921 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 25 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATACAA | 120043 | 98.45965830332757 | No Hit |
AGATAAAA | 222 | 0.1820851206929077 | RNA PCR Primer, Index 35 (100% over 8bp) |
AGATTCAA | 191 | 0.15665882005560977 | Illumina PCR Primer Index 8 (100% over 8bp) |
AGATACAT | 169 | 0.13861434863559188 | Illumina PCR Primer Index 2 (100% over 8bp) |
AGAAACAA | 149 | 0.12221028370830293 | No Hit |
ACATACAA | 124 | 0.10170520254919169 | No Hit |
TGATACAA | 122 | 0.10006479605646279 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short
Kmer Content
No overrepresented Kmers