FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176506
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGATGTG17392298.53602710389448No Hit
GCGATGTA4780.2708123236603855No Hit
GCGAGGTG4150.235119486023138No Hit
GCGATGGG3080.17449831733765422No Hit
GCGTTGTG2750.155802069051477No Hit
GGGATGTG1880.10651195993337337No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)