EGAF00005282692 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282692
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1246402
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	42995	3.449529124632342	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	26404	2.11841765337347	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	15305	1.227934486626305	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	9325	0.7481534849911987	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	7843	0.6292512367598897	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	4838	0.38815727189141225	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4317	0.3463569538559791	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2712	0.2175863004070918	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	2139	0.17161397366178807	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1551	0.12443818286556024	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	1339	0.10742922427916515	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3645	99.3016	1
GTCTCTC	3905	93.44416	2
TCTCTCA	4000	91.03397	3
CTGATGG	12735	88.26677	1
GGCTCAA	13385	83.97996	6
GCTCAAA	13430	83.59474	7
CTCAAAC	13575	82.705154	8
TCAAACA	13865	81.18292	9
TGGCTCA	14115	79.534706	5
GATGGCT	14450	77.74062	3
TCAGCTG	4895	74.0983	7
AGCTGGT	4985	73.34093	9
CTTCCGA	110	71.963615	4
TGATGGC	15730	71.514725	2
AGTCTCT	5145	71.33168	1
ATGGCTC	15940	70.56407	4
CTCTCAG	5295	69.3134	4
CTCAGCT	5485	66.38758	6
CAGCTGG	5705	64.58953	8
TCTCAGC	5995	61.22009	5