EGAF00005282695 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282695
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1253006
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	44027	3.5137102296397624	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	26823	2.140692063725154	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	15684	1.2517098880611903	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	9386	0.7490786157448568	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8117	0.6478021653527597	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	5079	0.4053452258009938	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4441	0.35442767233357225	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2736	0.21835490013615258	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	2269	0.18108452792724056	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1492	0.11907365168243408	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	1280	0.10215433924498367	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3850	101.23285	1
GTCTCTC	3995	99.454796	2
TCTCTCA	4205	95.001495	3
CTGATGG	13140	88.65424	1
GGCTCAA	13875	83.52447	6
GCTCAAA	13935	83.31979	7
CTCAAAC	14025	82.785126	8
TCAAACA	14365	80.78205	9
TGGCTCA	14510	79.86918	5
GATGGCT	14970	77.45995	3
AGCTGGT	5270	75.12898	9
CTCTCAG	5405	74.042755	4
AGTCTCT	5360	73.78915	1
TCAGCTG	5420	73.17675	7
TGATGGC	16115	72.1796	2
ATGGCTC	16615	70.094124	4
CTCAGCT	5765	69.17215	6
CAGCTGG	5925	67.66866	8
TCTCAGC	6090	65.953476	5
TTCCGAT	135	58.651577	5