EGAF00005282699 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282699
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1281827
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	45224	3.5280892039253344	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	27392	2.1369498380046608	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	15990	1.2474382268434039	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	9407	0.7338743839847343	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8200	0.6397119112017456	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	5099	0.3977915896606952	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4467	0.3484869643095363	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2785	0.21726800886547093	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	2102	0.16398468748122796	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1744	0.13605580160193223	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	1323	0.10321205591706213	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTATG	1289	0.10055959189500611	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3975	103.11133	1
GTCTCTC	4120	98.842094	2
TCTCTCA	4345	92.730156	3
CTGATGG	13495	86.95198	1
GGCTCAA	14235	82.62352	6
GCTCAAA	14220	82.56204	7
CTCAAAC	14335	81.909294	8
TCAAACA	14590	80.28974	9
TGGCTCA	15000	78.26577	5
GATGGCT	15195	77.18086	3
AGCTGGT	5235	76.88169	9
TCAGCTG	5300	75.92102	7
AGTCTCT	5445	74.48036	1
TGATGGC	16410	71.6856	2
CTCTCAG	5770	70.09739	4
ATGGCTC	16890	70.050865	4
CTCAGCT	5795	69.80588	6
CAGCTGG	5835	69.091415	8
TCTCAGC	6285	64.59263	5
CTTCCGA	140	61.687126	4