FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences714141
Sequences flagged as poor quality0
Sequence length8
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGAAAT70451798.65236696954803No Hit
TCAGAAAA21750.3045617042012712No Hit
ACAGAAAT14460.20248102265518994No Hit
TCACAAAT8150.11412312134438438No Hit
TAAGAAAT7430.1040410787225492No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)