EGAF00005282725 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282725
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	714141
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	25237	3.5338959673229793	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	15222	2.131511844299655	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	8993	1.2592751291411641	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	5363	0.7509721469569736	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	4514	0.6320880610411669	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	2904	0.4066423857473524	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	2436	0.3411091087054237	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1557	0.21802417169718585	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1106	0.15487137694096825	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	859	0.12028436961328366	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGATC	95	106.08163	6
TCTGATG	2140	100.323685	1
TCTCTCA	2415	97.725945	3
GTCTCTC	2405	97.53393	2
TTCCGAT	110	91.60952	5
CTTCCGA	110	91.59669	4
CTGATGG	7230	87.98799	1
TCAGCTG	2875	81.62354	7
GGCTCAA	7860	81.2338	6
CTCAAAC	7875	80.987656	8
GCTCAAA	7880	80.93628	7
AGCTGGT	2870	80.76248	9
TCAAACA	8075	78.89263	9
TGGCTCA	8180	78.22647	5
AGTCTCT	3025	77.40321	1
CTCTCAG	3090	76.16119	4
GATGGCT	8410	75.9749	3
CCGATCT	135	74.650024	7
CTCAGCT	3235	73.2078	6
CAGCTGG	3280	71.764496	8