FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences716849
Sequences flagged as poor quality0
Sequence length8
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGAAAT70606998.49619654906402No Hit
TCAGAAAA23130.32266209480657715No Hit
ACAGAAAT14350.20018162820900914No Hit
TCACAAAT9130.12736294533437306No Hit
TCAGAATT8110.1131340073013982No Hit
TAAGAAAT7900.11020452005931514No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)